Analysis Tools
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The BLAST online search tool is built using SequenceServer(v2.0) software (Priyam et al., 2019) ( http://www.sequenceserver.com/). |
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JBrowse is a widely used interactive genome visualization browser for displaying genome data resources, including genome sequences, gene structures, protein-coding gene annotations, and expression profiles. |
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In the "Gene Family Search" tool, users can search by Pfam ID and set filtering parameters such as genome database, control report type, and threshold screening. |
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The gene structure analysis tool can not only obtain gene structure information in batch based on the user-input gene list, but also draw gene structure maps online. |
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There are several options for downloading Passionfruit genome annotation data from the Passionfruit Genome Annotation Project annotation database. |
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PPOP(Physicochemical Properties Of Protein) is a tool for the computation of various Physicochemical properties of protein. The computed parameters include the length, molecular weight, theoretical pI and protein GRAVY (grand average of hydropathy). |
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KBAT(Kaks batch arithmetic tool) is an online KAKS batch computing tool developed based on kaks calculatorsoftware. |